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DNA-Tools

DNA-Tools is a project mainly written in Vim Script, it's free.

few utils for people working with DNA sequences

This is a mirror of http://www.vim.org/scripts/script.php?script_id=1207

My $0.02 worth of... Working with DNA sequences, especially if you don't have a Unix machine handy might need a few tools. Some of the modifications are simple enough that even a trivial Vim script would deal with. What you can do:

  • get the reverse-complement of a sequence
  • count A/T/C/Gs in a sequence and get a very crude Tm for a primer
  • brush-up a few file formats (PS from ClustalX, FASTA etc).

Many thanks to Will Nater and Tim Chase for helping!

Version "1.0" means that, up to now, I did not have any screwed-up sequence, but this is far from saying that it's definitely foolproof.

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