Reduce number of nodes required to get a fit

LCA Reducer [OPTIONS]

Common flags: --maxfits=NUM Number of impact factors --datafile=FILE Data file --nnlspath=DIR NNLS library path --rscriptpath=FILE Rscript path --rootnode=INT Root node --delta=DOUBLE Allowable fit error --mustinclude=FILE Must include nodes --mustincludecat=FILE Must include categories --numrandomnodes=INT Number of extra random nodes to include --namesfile=FILE Node names file -f --fitmeasure Use fits to measure closeness --distmeasure Use distance to measure closeness -k --knownchildren=ITEM Known children --runs=INT Number of runs -s --samples=INT Number of samples -i --interactive Enable to choose element from irreducible -b --bestfirst Run best first --mine Run mine --reducennls Just reduce the positive nodes that nnls outputs -? --help Display help message -V --version Print version information

http://github.com/nanonaren/Reducer