Sladd is a project mainly written in PERL and SHELL, it's free.
Spliced Leader ADDition (SLADD) program package for SLT analysis
Spliced Leader ADDition (SLADD) program package for SLT analysis
(c) Daniel Nilsson 2009-2010.
Released under the Perl Artistic License 2.0.
See the sladd_howto (.pdf, .odt) files for instructions.
Some of the main programs have embedded Plain Old Documentation. Use e.g. perldoc or the pod2* programs (pod2html, pod2man, pod2txt, ...) to view these.
perldoc run_maq.sh perldoc run_comparison.sh perldoc pipelinefunk.sh perldoc seqfunk.pm
Contact: daniel.nilsson.NO/SPAM.izb.unibe.ch, daniel.k.nilsson.NO/SPAM.gmail.com